Slide scanning compiler

The compiler creates montages by compiling virtual tissue images based on multiple individual image files.

It is a batch tool. This means that, if you scanned several slides and saved the scans for each slide in a single folder, the compiler automatically compiles a virtual tissue image for each slide.

Prerequisites

  1. Acquire>Capture>Scan slide was used to acquire 3D individual image files.
  2. Postpone Compilation was selected in the Slide scanning settings.

Compiling Virtual Tissue files

  1. Click Image>Compilers>Slide scanning.
  2. In the Browse for folder window, select the folder containing the acquired images.
  3. Select the location where you want to save the compiled images. The compiled images are generated.

 

See Slide scanning settings, Slide scanning overview